Optimization of algorithm of coding of genetic information of Chlamydia

Valentina A. Feodorova; Sergey S. Ulyanov; Sergey S. Zaytsev; Yury V. Saltykov; Onega V. Ulianova

doi:10.1117/12.2314640

26 April 2018 Optimization of algorithm of coding of genetic information of Chlamydia

Valentina A. Feodorova, Sergey S. Ulyanov, Sergey S. Zaytsev, Yury V. Saltykov, Onega V. Ulianova

Proceedings Volume 10716, Saratov Fall Meeting 2017: Optical Technologies in Biophysics and Medicine XIX; 107160Q (2018) https://doi.org/10.1117/12.2314640
Event: Saratov Fall Meeting 2017, 2017, Saratov, Russian Federation

Abstract

New method of coding of genetic information using coherent optical fields is developed. Universal technique of transformation of nucleotide sequences of bacterial gene into laser speckle pattern is suggested. Reference speckle patterns of the nucleotide sequences of omp1 gene of typical wild strains of Chlamydia trachomatis of genovars D, E, F, G, J and K and Chlamydia psittaci serovar I as well are generated. Algorithm of coding of gene information into speckle pattern is optimized. Fully developed speckles with Gaussian statistics for gene-based speckles have been used as criterion of optimization.

Citation Download Citation

Valentina A. Feodorova, Sergey S. Ulyanov, Sergey S. Zaytsev, Yury V. Saltykov, and Onega V. Ulianova "Optimization of algorithm of coding of genetic information of Chlamydia", Proc. SPIE 10716, Saratov Fall Meeting 2017: Optical Technologies in Biophysics and Medicine XIX, 107160Q (26 April 2018); https://doi.org/10.1117/12.2314640

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